General Information of Synthetic Binding Protein (SBP) (ID: SBP000810)
SBP Name
Abl/Hck SH3 domain anti-HIV-1 Nef A1
Synonyms
Abl/Hck SH3 domain-based binder A1
Molecular Weight 6.4 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Expression System Escherichia coli BL21 (DE3)
Selection Method Phage display
Highest Status Research
Sequence Length 57
SBP Sequence
>Abl/Hck SH3 domain anti-HIV-1 Nef A1
GPNSHNSNTPGIREAGSEDIIVVALYDYVSWSPDDLSFQKGDQMVVLEESGEWWKAR
3D Structure
Computationally Modelled Structure
Click to Save PDB File
Template Name Hck-SH3
Protein Scaffold Information of This SBP
Scaffold ID PS003
Scaffold Info
[1]
Scaffold Name Abl/Hck SH3 domain
Scaffold Class Non-Antibody
Fold Type Beta-Sheets + Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
Protein Nef
BTS Info
Inhibitor Human immunodeficiency virus infection (HIV infection) [ICD-11: 1C62.Z] Kd: 7 nM University of Tampere [1]
References
1 SH3 domains with high affinity and engineered ligand specificities targeted to HIV-1 Nef. J Mol Biol. 1999 Nov 12;293(5):1097-106.