General Information of Synthetic Binding Protein (SBP) (ID: SBP000697)
SBP Name
VNAR anti-EpCAM clone SH2
Synonyms
VNAR SH2
Molecular Weight 12.2 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Expression System Expi293F?human cells
Selection Method Yeast display
Highest Status Research
Sequence Length 110
SBP Sequence
>VNAR anti-EpCAM clone SH2
MAARLEQTPTTTTKEAGESLTINCVLKPEWTILGRTYWYFTKKGATKKARLSTGGRYSDT
KNTASKSFSLRISDLRVEDSGTYHCEALIYSDMGMIMWKIEGGGTPLTVK
3D Structure
Computationally Modelled Structure
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Template Name vNAR H3 and vNAR H5
Template Sequence
>vNAR H3
MAARLEQTPTTTTKEAGESLTINCVLKGSGYVLGRTYWYFTKKGATKKASLSTGGRYSDT
KNTASKSFSLRISDLRVEDSGTYHCEALIYSDMGMIMWKIEGGGTVLTVN
>vNAR H5
MAPRLEQTPTTTTKEAGESLTINCVLKGSSCTLGSTYWCFTKKGATKKASLSTGGRYSDT
KNTASKSFSLRISDLRVEDSGTYHCEATIWDMDKGQRHRIEGGGTILTVK
Protein Scaffold Information of This SBP
Scaffold ID PS065
Scaffold Info
[1]
Scaffold Name vNAR
Scaffold Class Antibody fragment
Fold Type Beta-Sheets + Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
Epithelial cell adhesion molecule
BTS Info
Binder Research tool N.A. Technical University of Darmstadt [1]
References
1 A simplified procedure for antibody engineering by yeast surface display: Coupling display levels and target binding by ribosomal skipping. Biotechnol J. 2017 Feb;12(2).