General Information of Synthetic Binding Protein (SBP) (ID: SBP003630)
SBP Name
Fab anti-IRES V39
Synonyms
Fab V39
Molecular Weight 47 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Highest Status Research
Sequence Length 437
SBP Sequence
>Heavy chain
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPSSGSTYY
ADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRYSRYRRGFDYWGQGTLVTVS
SASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
>Light chain
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVP
SRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSSSRYTFGQGTKVEIKRTVAAPSVFIFP
PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL
TLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
3D Structure
Computationally Modelled Structure
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Template Name HCV3
Protein Scaffold Information of This SBP
Scaffold ID PS034
Scaffold Info
[1]
Scaffold Name Fab
Scaffold Class Antibody fragment
Fold Type Beta-Sheets + Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
Hepatitis C virus internal ribosomal entry site RNA
BTS Info
binder Hepatitis C virus infection [ICD-11: XN1EZ] N.A. National University of Sciences and Technology [1]
References
1 Antibody designing against IIIabc junction (JIIIabc) of HCV IRES through affinity maturation; RNA-Antibody docking and interaction analysis. PLoS One. 2023 Sep 8;18(9):e0291213.