General Information of Synthetic Binding Protein (SBP) (ID: SBP000369)
SBP Name
Affimer anti-K33-diubiquitin
Synonyms
Affimer K33
Molecular Weight 13.2 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Selection Method Phage display
Highest Status Research
PDB ID 5OHM; 5OHV
Sequence Length 116
SBP Sequence
>Affimer anti-K33-diubiquitin
MSAATGVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQIWEMDASKETM
YYLTLEAKDGGKKKLYEAKVWVKMTHWIGAMNNFKELQEFKPVGDAAAAHHHHHHG
3D Structure
Experimentally Validated Structure
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Template Name Adhiron
Protein Scaffold Information of This SBP
Scaffold ID PS006
Scaffold Info
[1]
Scaffold Name Affimer
Scaffold Class Non-Antibody
Fold Type One Alpha-Helix + Beta-Sheets+ Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
K33 diubiquitin
BTS Info
Binder Tools for studying ubiquitin chain types N.A. Division of Protein and Nucleic Acid Chemistry, MRC Laboratory of Molecular Biology [1]
References
1 Ubiquitin Linkage-Specific Affimers Reveal Insights into K6-Linked Ubiquitin Signaling. Mol Cell. 2017 Oct 5;68(1):233-246.e5.