General Information of Synthetic Binding Protein (SBP) (ID: SBP000368)
SBP Name
Affimer anti-K6-diubiquitin
Synonyms
Affimer K6
Molecular Weight 13.2 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Selection Method Phage display
Highest Status Research
PDB ID 5OHL
Sequence Length 116
SBP Sequence
>Affimer anti-K6-diubiquitin
MSAATGVRAVPGNENSLEIEELARFAVDEHNKKENALLEFVRVVKAKEQSWKDDELFDTM
YYLTLEAKDGGKKKLYEAKVWVKASGIVMYQMNFKELQEFKPVGDAAAAHHHHHHG
3D Structure
Experimentally Validated Structure
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Template Name Adhiron
Protein Scaffold Information of This SBP
Scaffold ID PS006
Scaffold Info
[1]
Scaffold Name Affimer
Scaffold Class Non-Antibody
Fold Type One Alpha-Helix + Beta-Sheets+ Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
K6 diubiquitin
BTS Info
Binder Tools for studying ubiquitin chain types Kd: 0.02 nM Division of Protein and Nucleic Acid Chemistry, MRC Laboratory of Molecular Biology [1]
References
1 Ubiquitin Linkage-Specific Affimers Reveal Insights into K6-Linked Ubiquitin Signaling. Mol Cell. 2017 Oct 5;68(1):233-246.e5.