General Information of Synthetic Binding Protein (SBP) (ID: SBP003083)
SBP Name
scFv anti-CSPG4 UC8
Synonyms
scFv UC8
Molecular Weight 26.4 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Expression System Escherichia coli BL21 (DE3)
Selection Method Yeast display
Highest Status Research
Sequence Length 251
SBP Sequence
>scFv anti-CSPG4 UC8
EAQLVESGAEVKKPGDSLKISCKGFGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSETTY
SPAFQGDVTISVDKSIGTAYLQWNSLKASDTGIYYCARRRGNYYMDVWGNGTPVTVSSLK
SGGGGSGGGGSSGGGSRSAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQH
PGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRHV
FGTGTQLTVLG
3D Structure
Computationally Modelled Structure
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Template Name scFv 1H10
Protein Scaffold Information of This SBP
Scaffold ID PS057
Scaffold Info
[1]
Scaffold Name scFv
Scaffold Class Antibody fragment
Fold Type Beta-Sheets + Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
Chondroitin sulfate proteoglycan 4
BTS Info
Binder Cancers [ICD-11: 2D4Z] Kd: 5.6 nM Duke University [1]
References
1 Selection of novel affinity-matured human chondroitin sulfate proteoglycan 4 antibody fragments by yeast display. Protein Eng Des Sel. 2017 Sep 1;30(9):639-647.