Details of the SBP

General Information of Synthetic Binding Protein (SBP) (ID: SBP000048)
SBP Name
Monobody anti-Abl-SH2 AL38
Synonyms
Monobody AL38
Molecular Weight 10.8 kDa
Design Method Traditional methods (Site-directed mutagenesis and/or Directed evolution)
Expression System Yeast
Selection Method Yeast display
Highest Status Research
Sequence Length 98
SBP Sequence
>Monobody anti-Abl-SH2 AL38
VSSVPTKLEVVAATPTSLLISWDALHYSGRGKVHYYRITYGETGGNSPVQEFTVPGSSST
ATISGLSPGVDYTITVYAYYQSYGYWYYMSPISINYRT
3D Structure
Computationally Modelled Structure
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Template Name Fibronectin type III domain (FN3)
Template Sequence Description X denotes a mixture of 30% Tyr, 15% Ser, 10% Gly, 5% Phe, 5% Trp and 2.5% each of all the other amino acids except for Cys; B denotes a mixture of Gly, Ser and Tyr; J denotes a mixture of Ser and Tyr.
Protein Scaffold Information of This SBP
Scaffold ID PS047
Scaffold Info
[1]
Scaffold Name Monobody
Scaffold Class Non-Antibody
Fold Type Beta-Sheets + Loops
Binding Target(s) of This SBP (BTS)
BTS Name Details Mechanism Application Affinity Research Organization Ref
Tyrosine-protein kinase ABL1
BTS Info
Binder Tools for identifying the unanticipated mode of monobody-target interactions Kd: 11 nM University of Chicago [1]
References
1 Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold. J Mol Biol. 2012 Jan 13;415(2):393-405.